FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005725259

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005725259
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19056876
Sequences flagged as poor quality0
Sequence length42
%GC17

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA11867106.227201142516748No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4678332.4549301784825595No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2431131.275723261252264No Hit
CCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2174991.1413150822831613No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1232590.6467954138968003No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA997020.5231812391495857No Hit
CTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA814420.42736280594993636No Hit
TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA809780.4249279892465061No Hit
GCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA799280.41941816696503664No Hit
TCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA510910.26809745731671863No Hit
ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA503460.2641881072217713No Hit
CCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA426000.22354136113390252No Hit
GTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA407100.21362368102725757No Hit
GCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA383660.20132365871510105No Hit
CGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA348780.1830205538410388No Hit
ACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA334850.175710856280956No Hit
CTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA321350.1686267990619239No Hit
TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA294790.1546895724147022No Hit
ATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA283260.14863926280466955No Hit
GGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA273150.14333409106508327No Hit
TGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA270910.14215866231170313No Hit
GTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA214510.1125630454855245No Hit
TTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA206350.10828112645535395No Hit
GGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA206320.10826538410597833No Hit
TGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA198950.10439801360936599No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)