FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005725269

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005725269
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11809666
Sequences flagged as poor quality0
Sequence length16
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAA4132593.4993284314729984No Hit
CAAAAAAAAAAAAAAA1446831.2251235555688027No Hit
GGGGGGGGGGGGGGGG1165600.986988116344696No Hit
CCAAAAAAAAAAAAAA623460.5279234823406521No Hit
TAAAAAAAAAAAAAAA520070.4403765525629598No Hit
GAAAAAAAAAAAAAAA398500.3374354532973244No Hit
CTAAAAAAAAAAAAAA283900.24039629909939875No Hit
TCAAAAAAAAAAAAAA282160.23892292974246687No Hit
GCAAAAAAAAAAAAAA240200.20339271237645504No Hit
ACAAAAAAAAAAAAAA195590.1656185704151159No Hit
TCCAAAAAAAAAAAAA155520.13168873700577138No Hit
GTAAAAAAAAAAAAAA146840.12433882550107683No Hit
CCCAAAAAAAAAAAAA129810.10991843461110584No Hit
ATAAAAAAAAAAAAAA126540.10714951633687185No Hit
TTAAAAAAAAAAAAAA118500.10034153379104879No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)