FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005725271

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005725271
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16550896
Sequences flagged as poor quality0
Sequence length16
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAA5432633.282378186655272No Hit
CAAAAAAAAAAAAAAA2350821.4203581485860344No Hit
GGGGGGGGGGGGGGGG2009911.214381384548607No Hit
CCAAAAAAAAAAAAAA1125430.6799813133983803No Hit
TAAAAAAAAAAAAAAA573870.34673047308133653No Hit
ACAAAAAAAAAAAAAA399210.2412014431122037No Hit
CTAAAAAAAAAAAAAA385890.23315354044880712No Hit
TCAAAAAAAAAAAAAA377470.2280662025790024No Hit
TCCAAAAAAAAAAAAA258930.1564447024499459No Hit
ACCAAAAAAAAAAAAA239230.14454202358591342No Hit
GAAAAAAAAAAAAAAA236810.14307986709601703No Hit
GCAAAAAAAAAAAAAA231410.13981720385409951No Hit
CCCAAAAAAAAAAAAA221020.13353959809789148No Hit
ATAAAAAAAAAAAAAA188300.11377027563945782No Hit
CTCAAAAAAAAAAAAA173310.10471336415865341No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)