FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005725274

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005725274
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74093673
Sequences flagged as poor quality0
Sequence length42
%GC29

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1490135320.11150533730458No Hit
ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT6271530.846432596208316No Hit
TCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAACC3678080.4964094572555473No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2504750.3380518063937794No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2217130.2992333771872802No Hit
TATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2193330.29602122707562356No Hit
TCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1131380.1526958988792471No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1031000.1391481834083188No Hit
TCTTTTAGAGTTGTTGGTTTATGCTCATCCCTACTCATAACC860580.11614756903737247No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)