FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005725290

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005725290
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26090561
Sequences flagged as poor quality0
Sequence length42
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG374420.14350783794951744No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGG370040.14182906990769573No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN286400.1097714993556482No Hit
CCGGGCTCCTCGGGGTGCGCGGCTGGGGGTTCCCTCGCAGGG272260.10435191485533792No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)