FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005725292

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005725292
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43979710
Sequences flagged as poor quality0
Sequence length42
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGA1190710.2707407574993105No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGG729320.1658310161663185No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG691940.15733164225048324No Hit
CGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG608960.13846385071661454No Hit
CATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC480400.10923218911629931No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)