FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005725300

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005725300
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16335491
Sequences flagged as poor quality0
Sequence length42
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGG239920.14687039403957922No Hit
CCGGGCTCCTCGGGGTGCGCGGCTGGGGGTTCCCTCGCAGGG205270.1256589104055703No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG205130.1255732074413925No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN178130.10904477863567125No Hit
GTCCGAGCCGCGACGGGCGAGGGGCGGACGTTCGTGGCGAAC175380.10736132755360704No Hit
GATCAATCGCCCCCGGGGGTGCCTCCGGGCTCCTCGGGGTGC171270.10484533339095838No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)