Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005725464 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 15539517 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TGTAGGG | 55595 | 0.0 | 9.128368 | 94 |
CGTGTAG | 64775 | 0.0 | 9.115146 | 94 |
AGAGTGT | 24325 | 0.0 | 8.919255 | 94 |
TAGGGAA | 46285 | 0.0 | 8.828291 | 94 |
AAAGAGT | 30735 | 0.0 | 8.705693 | 94 |
GTAGGGA | 51845 | 0.0 | 8.613635 | 94 |
TCGTGTA | 69060 | 0.0 | 8.400295 | 94 |
CGTCGTG | 82750 | 0.0 | 8.228071 | 94 |
GTGTAGG | 60565 | 0.0 | 8.108491 | 94 |
GAGTGTA | 7215 | 0.0 | 7.923626 | 94 |
GTCGTGT | 74785 | 0.0 | 7.788559 | 94 |
AGCGTCG | 98500 | 0.0 | 7.730678 | 94 |
AAGAGTG | 29665 | 0.0 | 7.550644 | 94 |
TTTCGCG | 630 | 0.0031305116 | 7.4358616 | 1 |
GAGCGTC | 108135 | 0.0 | 7.1198645 | 94 |
GCGTCGT | 90245 | 0.0 | 7.05662 | 94 |
AGGGAAA | 54680 | 0.0 | 7.0529656 | 94 |
AGAGCGT | 117120 | 0.0 | 6.9417486 | 94 |
GGAAAGA | 50520 | 0.0 | 6.6505303 | 94 |
AAGAGCG | 126160 | 0.0 | 6.5743384 | 94 |