FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005725945

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005725945
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73959958
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTACGTA1924041426.01463619003137No Hit
ATAGTTAC1876547025.372472493832404No Hit
TGCTGAGT1812234324.50291142674797No Hit
GAGCACCG1713185223.163685409340008No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)