FastQCFastQC Report
Thu 23 Jun 2022
EGAF00005725950

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005725950
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences78227262
Sequences flagged as poor quality0
Sequence length8
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAACGCCT2591738733.130888564142765No Hit
TGTGCGGG2507661832.056111078002445No Hit
ACCATAAC2087995626.69140586819976No Hit
GTGTATTA52083966.658031825273395No Hit
TGTGCGGA2307840.2950173559698408No Hit
CAACGCCA1158970.14815423298338118No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)