FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005725960

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005725960
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73082735
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTACGTA1898162125.972784132941936No Hit
ATAGTTAC1855151425.38426346523567No Hit
TGCTGAGT1790450824.498957243458392No Hit
GAGCACCG1697798223.231180387542967No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)