FastQCFastQC Report
Thu 23 Jun 2022
EGAF00005725985

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005725985
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103227148
Sequences flagged as poor quality0
Sequence length8
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGCAGC2937947428.460995551286565No Hit
ACCCTCCT2759678426.734037057770887No Hit
TGGAATTA2274906522.037870309077995No Hit
CAATGGAG2249946021.796068607843356No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)