FastQCFastQC Report
Thu 12 May 2022
EGAF00005726117

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005726117
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34521658
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTATGCCGTCTTCTGCTTGAGATCGGAAGAGCGTCGTGTAGGGAAAGAG8101932.346912190602201Illumina Single End PCR Primer 1 (100% over 30bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3886151.1257136027475851No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)