FastQCFastQC Report
Tue 26 Apr 2022
EGAF00005726163

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005726163
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90603740
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTATGCCGTCTTCTGCTTGAGATCGGAAGAGCGTCGTGTAGGGAAAGAG4772260.5267177712531513Illumina Single End PCR Primer 1 (100% over 30bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1092460.12057559654822195No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)