Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005727636 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 32662398 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTCGTAT | 1545 | 0.0 | 12.084344 | 44 |
TCGTATG | 1855 | 0.0 | 10.80539 | 45 |
TCTCGTA | 1530 | 0.0 | 9.850468 | 43 |
ATCTCGT | 2215 | 0.0 | 7.0072165 | 42 |
GATCGGA | 3260 | 0.0 | 5.9013915 | 1 |
CGTCTGA | 3730 | 0.0 | 5.54795 | 16 |
ACACGTC | 3420 | 0.0 | 5.524675 | 13 |
CGTATGC | 1270 | 2.910383E-10 | 5.4973373 | 45 |
ATCGGAA | 3805 | 0.0 | 5.2083926 | 2 |
TCGGAAG | 3990 | 0.0 | 5.0230584 | 3 |