FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005727667

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005727667
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12105033
Sequences flagged as poor quality0
Sequence length51
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACGGCG1352.6605107E-413.3301956
TCTCGTA6200.013.06338443
CTCGTAT6400.012.65510144
TCGTATG7750.011.90214545
ATCTCGT9450.08.8087642
ACACGTC12050.07.280684513
CGTCTGA12750.07.233830516
CACGTCT15200.06.06785114
ACGTCTG15150.05.93939215
AGATCGG26850.05.027476345
Produced by FastQC (version 0.11.5)