EGAF00005727728 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005727728
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12105448
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGGCTACATCTCGTATGCC	107232	0.8858160391916102	TruSeq Adapter, Index 11 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACGGCTA	13160	39.303307	32
CGGCTAC	13165	38.96529	33
GATCGGA	13990	38.736324	1
GTCACGG	13325	38.716915	29
CTCGTAT	13375	38.40539	42
CGTATGC	13455	38.359245	44
TCTCGTA	13485	38.06047	41
ATCGGAA	14290	38.04915	2
AGTCACG	13605	38.0357	28
TCGGAAG	14265	38.022453	3
CATCTCG	13500	37.818172	39
TCACGGC	13660	37.76695	30
CACGGCT	13680	37.72709	31
ATCTCGT	13640	37.578476	40
TCGTATG	13725	37.572628	43
CGGAAGA	14475	37.48638	4
ACACGTC	14365	37.414997	13
GTATGCC	13920	37.2227	45
CGTCTGA	14460	37.04472	16
ACGTCTG	14670	36.514427	15