FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005727732

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005727732
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9857601
Sequences flagged as poor quality0
Sequence length51
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGTAT4450.014.15456244
TCTCGTA4950.012.2703543
TCGTATG6450.09.41749845
CGTATGC4702.2320819E-88.61600945
GATCGGA7650.08.6050631
ATCGGAA8800.08.1818522
ATCTCGT7800.08.075442
ACACGTC9101.4551915E-116.9212813
CGTCTGA9455.456968E-126.90296916
TCGGAAG9751.2732926E-116.69094373
ACGTCTG11905.2750693E-115.859822815
CGGAAGA12907.8216544E-115.58022984
Produced by FastQC (version 0.11.5)