Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005729487 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 47686945 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTCGTCTGCGGTGTAGATCT | 395339 | 0.82902983195925 | Illumina Single End PCR Primer 1 (97% over 34bp) |
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 226791 | 0.4755829923682467 | No Hit |
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT | 166516 | 0.34918571529377695 | No Hit |
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTCGTCTGCGGTGTAGATCTC | 128718 | 0.2699229317373969 | Illumina Single End PCR Primer 1 (96% over 33bp) |