EGAF00005729547 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005729547
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	123934580
Sequences flagged as poor quality	0
Sequence length	101
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGCTGGCCTTCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT	5708760	4.606268887989131	No Hit
AGCTGGCCTTCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA	1082328	0.8733059005807741	No Hit
AGCTGGCCTTCGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC	283561	0.22879893569655863	No Hit
GCCGAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTTGCTGGTCA	256921	0.20730372427130508	No Hit
AACTGGCGCCGAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTTG	166061	0.13399085227060922	No Hit
ACTGGCGCCGAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTTGC	158119	0.1275826327083208	No Hit
AAACTGGCGCCGAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTT	148038	0.1194485025890272	No Hit
GAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTTGCTGGTCAGAT	147260	0.11882075204515156	No Hit
GGCGCCGAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTTGCTGG	138558	0.11179930573049104	No Hit
CTGGCGCCGAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTTGCT	131149	0.10582115177216883	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TTCGGCG	678250	89.037094	9
CCTTCGG	696195	86.87492	7
GCCTTCG	742210	86.85694	6
AGCTGGC	917980	82.156006	1
TGGCCTT	930040	81.168846	4
GGCCTTC	932805	80.80404	5
TTCGTAC	50760	79.22451	9
GCTGGCC	999575	75.89389	2
CTGGCCT	1016990	74.427864	3
CTTCGTA	54830	73.38697	8
CTTCGGC	1027720	59.26116	8
TTCTGAA	199095	55.63251	9
CCTTCGT	73515	55.341335	7
CTTCTGA	209915	52.760406	8
GCCTTCT	234945	47.489803	6
TCGGCGT	687010	44.117058	10-11
CGGCGTC	703605	43.567593	10-11
ATCTCGA	703870	43.542828	18-19
CGTCCAT	701395	43.3687	14-15
GCGTCCA	710710	43.20965	12-13