FastQCFastQC Report
Sat 2 Jul 2022
EGAF00005729561

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005729561
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105693958
Sequences flagged as poor quality0
Sequence length101
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGTTCTGTCGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT17684691.673197818933037No Hit
ACGTTCTGTCGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA3951450.37385769960473997No Hit
ACGTTCTGTCGGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC1062830.10055730905639848No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)