FastQCFastQC Report
Tue 26 Apr 2022
EGAF00005729564

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005729564
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences107259685
Sequences flagged as poor quality0
Sequence length101
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGTCGCGACGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT11967691.1157677742574015No Hit
GAGTCGCGACGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA4445460.4144576781108391No Hit
GAGTCGCGACGGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC1162600.1083911443521394No Hit
GCCGAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTTGCTGGTCA1142610.10652744318613279No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)