FastQCFastQC Report
Tue 5 Jul 2022
EGAF00005729580

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005729580
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences211938455
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAGTCGATATGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT6933010.3271237397668111No Hit
GTAGTCGATATTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA2197630.1036918948946759No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)