FastQCFastQC Report
Sat 2 Jul 2022
EGAF00005729596

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005729596
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105687074
Sequences flagged as poor quality0
Sequence length101
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTTTGATTAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT12142831.148941828023359No Hit
GTCTTTGATTATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA3885630.3676542317748337No Hit
GCCGAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTTGCTGGTCA1648510.15598028572538586No Hit
TGGCGCCGAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTTGCTG1057870.10009454893225636No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)