FastQCFastQC Report
Sat 2 Jul 2022
EGAF00005729597

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005729597
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105687074
Sequences flagged as poor quality0
Sequence length101
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTTTGATTAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT23971772.2681837137434613No Hit
GTCTTTGATTATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA4480680.4239572381386962No Hit
TCTTTGATTAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGTA1349050.12764569487466365No Hit
GTCTTTGATTAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC1075340.10174754199364058No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)