FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005729631

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005729631
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences108867239
Sequences flagged as poor quality0
Sequence length101
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGCTTAATCGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT13478701.2380859589908402No Hit
CAGCTTAATCGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA2452240.22525049983126696No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)