FastQCFastQC Report
Tue 9 Aug 2022
EGAF00005732554

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005732554
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37145419
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACG878790.23658098997348773No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC563570.15171992002566992No Hit
CAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAG517010.13918539995470236No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)