FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005732603

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005732603
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80169514
Sequences flagged as poor quality0
Sequence length75
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTATCA141850.044.2298749
CGCCGTA166200.040.37396646
GATCGGA312550.039.4203381
TCCGATC129700.035.0006124
TCGGAAG366350.031.765763
GCGTCGT210750.031.63382111
GCCGTAT228250.031.30065547
AGAGCGT285650.030.2959218
CGGCATT194050.028.9461461
CGTGTAG262250.028.92641615
AAGAGCG375800.028.6546047
CCGTATC243400.028.44186448
GGTCGCC302800.028.26147743
AACCGCT175700.028.23397815
GTAGATC272150.027.61764731
GATCTCG391000.027.06466934
TGGTCGC205200.026.98976742
GTCGTGT225100.026.98619813
ATCGGAA468600.026.1450612
CGGAAGA452950.026.0719684
Produced by FastQC (version 0.11.5)