FastQCFastQC Report
Tue 9 Aug 2022
EGAF00005732824

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005732824
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39907240
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACG1014000.25408923293116736No Hit
CAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAG581580.14573295472200032No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC503240.12610243153873835No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)