FastQCFastQC Report
Thu 11 Aug 2022
EGAF00005732826

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005732826
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33692709
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACG662770.19671021407034975No Hit
CAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAG405730.12042071179257209No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC384360.11407809327531365No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)