FastQCFastQC Report
Tue 9 Aug 2022
EGAF00005732830

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005732830
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36271974
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACG1076900.2968958899231677No Hit
CAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAG595620.1642094251611451No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC547200.1508602757600124No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)