FastQCFastQC Report
Thu 11 Aug 2022
EGAF00005733024

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005733024
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34095290
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC453760.13308583091682166No Hit
CTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACG391910.11494549540420393No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)