FastQCFastQC Report
Thu 11 Aug 2022
EGAF00005733134

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005733134
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33357741
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT479300.1436847896864479No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC465500.13954781890056644No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA369310.11071193340100578No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)