FastQCFastQC Report
Thu 6 Oct 2022
EGAF00005733429

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005733429
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33613940
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA382600.11382182511184347No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT373000.11096586713726507No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC367490.10932666625810603No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)