FastQCFastQC Report
Thu 6 Oct 2022
EGAF00005733455

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005733455
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35879554
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT417580.11638383241887568No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC376190.104848014554473No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)