FastQCFastQC Report
Sun 23 Oct 2022
EGAF00005733471

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005733471
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34209720
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC453010.132421428763521No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA387690.11332744027136148No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT352520.1030467364246185No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)