FastQCFastQC Report
Wed 15 May 2024
EGAF00005733668

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005733668
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences196616089
Total Bases5.1 Gbp
Sequences flagged as poor quality0
Sequence length26
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCA2125240.10809084906576491No Hit
CGTTCGTTATCGGAATTAACCAGACA2032880.10339336980708634No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)