FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005733683

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005733683
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98882094
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGCGAT294150.017.5590021
TGGCTGG457000.017.4512771
ATGCGAT300800.017.4404071
CAATGGA324950.017.36638
ACTGAAC246650.017.1818621
CTCGAAA259450.017.167691
GAATGAA246950.017.1163961
TGATTTC390700.017.0814631
CAATGAA215350.017.0441888
CTGCCTA377400.016.9008621
AGCTTGA331400.016.8511331
GGCGACT294000.016.829011
TGACTAG284150.016.809891
TGAGCAT312700.016.661441
GCTGCGA275950.016.5874251
ATGAATG203200.016.51809110
TTGACTT390800.016.4391981
TGACAAC341700.016.4076421
CTGCGGA299500.016.3695371
CGCTGGA264900.016.35341
Produced by FastQC (version 0.11.5)