FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005733685

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005733685
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98914692
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGCGAT297300.017.589961
ATGCGAT297500.017.5074711
TGGCTGG454100.017.4351881
TGATTTC390500.017.257571
ACTGAAC242900.017.165011
GAATGAA251050.017.142091
CAATGGA329400.017.134848
CAATGAA213650.017.0816448
CTCGAAA253800.017.0155141
CTGCCTA380800.016.9479561
AGCTTGA326900.016.8944721
GGCGACT296950.016.8825321
TGACTAG283900.016.8757821
TGAGCAT303750.016.735281
CGCTTCA310200.016.5938381
CGCTGGA260600.016.4946921
ATAACGC273050.016.4868351
TTGACTT384200.016.4618571
TGACAAC345900.016.377431
ATAGACC234800.016.3715461
Produced by FastQC (version 0.11.5)