FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005736833

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005736833
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2486772
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG1200.072.08
TCGGCGG2200.042.5454569
TATCGGC2300.037.5652167
TTATCGG3103.092282E-1127.8709666
ATTATCG4904.5474735E-1019.1020415
TCGTCGC1353.178502E-813.86666715-19
CTCGTCG1405.120819E-813.371428515-19
CGATCGG1202.5784111E-512.0130-134
CGTCGCT1602.9186776E-711.715-19
CCGGCGA2055.853326E-810.53658630-34
TCGTTAC2354.226802E-68.57872315-19
GGTTCGT2551.3895351E-68.47058815-19
TCCGGCG2252.2708971E-58.3225-29
CAGTACC14256.768936E-67.57894758
CGGCGAG3052.1788037E-67.55409830-34
CGTTACC3102.7805254E-67.432257715-19
GAATCCG4007.2953186E-47.26
CCAGTAC15051.4621644E-57.17607937
GTTACCG2651.7352749E-47.06415120-24
GCTATTA19752.8894465E-76.92658232
Produced by FastQC (version 0.11.5)