FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005737243

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005737243
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3286210
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG1502.766319E-838.48
TCGGCGG2151.9394065E-830.1395369
TATCGGC2801.5050135E-418.07
GCGCGAT3656.330075E-515.7808232
TTATCGG2950.004406035414.6440696
CGCGATC3900.001862673612.9230773
TCGTCGC1751.077036E-59.87428615-19
CTCGTCG2005.2069263E-58.6415-19
GCGATCT9300.00210699377.7419354
CGTCGCT1900.0025976397.5789476
CAGTACC17902.3486873E-56.4357558
CCAGTAC18900.00209532455.33333357
Produced by FastQC (version 0.11.5)