FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005737249

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005737249
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6573680
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG2300.050.0869568
TCGGCGG4750.025.7684219
TATCGGC5251.8189894E-1220.5714287
TTATCGG5752.0372681E-1017.5304366
ATTATCG13252.4088677E-68.1509445
TCGTCGC2456.579098E-57.64081615-19
CTCGTCG3100.00116833886.03870915-19
CCGGCGA3753.0543876E-45.759999830-34
CAGTACC37959.900759E-95.3122538
CCAGTAC37454.045978E-85.19092137
Produced by FastQC (version 0.11.5)