FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005737281

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005737281
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6579495
Sequences flagged as poor quality0
Sequence length150
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG2950.039.0508468
TATCGGC5250.021.9428567
TCGGCGG5607.2759576E-1219.2857139
TTATCGG6351.8189894E-1218.1417336
ATTATCG11001.7311904E-69.1636375
TCGTCGC3453.0468073E-98.34782615-19
CTCGTCG3902.9729563E-87.384615415-19
CGTCGCT4453.3043034E-76.4719115-19
Produced by FastQC (version 0.11.5)