FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005737358

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005737358
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3323851
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGATC5952.3653696E-512.1008413
GCGCGAT5850.00336133539.8461542
CTCGTCG1850.00199929167.78378415-19
GCGATCT12809.0048456E-46.754
GACCTCC24704.90636E-86.41295532
CCAGTAC19851.0572044E-45.80352647
TCCAGTA25102.84817E-65.73705156
AGACCTC27201.987919E-65.55882361
CTCACGC24103.0287934E-45.0788383
Produced by FastQC (version 0.11.5)