FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005737359

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005737359
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3323851
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG1201.8189894E-1260.08
TCGGCGG2151.2732926E-1136.837219
TATCGGC3001.8406354E-824.07
TTATCGG3204.1699983E-415.756
ATTATCG5500.002014779710.4727275
CCGGCGA2151.2816388E-58.70697730-34
TCCGGCG2250.00172316847.0425-29
CGGCGAG2558.6190033E-46.776470730-34
AATCCGG3405.4671086E-45.929411425-29
CGCTGTA3900.00310223975.169231110-114
Produced by FastQC (version 0.11.5)