FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005737423

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005737423
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3305861
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG1102.7284841E-1158.9090928
TCGGCGG2207.9613164E-726.1818189
TATCGGC2401.6992562E-624.07
TTATCGG2857.5442877E-620.2105266
CTCGTCG1501.2613418E-712.480000515-19
ATTATCG5752.3091126E-411.2695665
TCGTCGC1759.291107E-710.69714315-19
CGTCGCT2252.2710603E-58.3215-19
CAGTACC18306.0326056E-77.0819678
TCCGGCG2150.00864327056.697674825-29
ACCGTAA4053.2044063E-66.435-39
CCAGTAC19301.0392701E-56.3419697
AGTACCT24001.284332E-66.09
AGACCTC25801.5439086E-45.0232561
Produced by FastQC (version 0.11.5)