FastQCFastQC Report
Wed 8 May 2024
EGAF00005738066

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005738066
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2432653
Total Bases364.8 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGACCTCCAGTACCTCCTCGTCGCTGGTATAACCTTCACCGTAAAAGCTC115450.47458474348787105No Hit
TGCTATTATCGGCGGGTTCGTTACCGAATCCGGCGAGAAAATTAAGGGTC89420.36758222401633117No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)