FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005738372

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005738372
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2475075
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGCGC6709.4560016E-49.6716411
CTCACGC18806.912471E-66.5106383
GCTCACG17751.4441682E-46.08450752
ACCTCAC19756.153245E-45.4683541
TCACGCC24657.53977E-55.25760654
CGCCTGT25101.0025477E-45.1633477
CCCGGCC18300.0083341835.11475377
CACGCCT24153.1218852E-45.06832275
ACGCCTG24403.6374014E-45.0163936
Produced by FastQC (version 0.11.5)