FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005738495

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005738495
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2481777
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG700.00109354741.1428578
ACCGCGC6301.2805685E-814.85714151
CGCGCCC8204.9641385E-610.5365863
CCGCGCC9552.848832E-69.8010462
CTCACGC20606.0025377E-76.64077663
GCTCACG20903.535465E-55.85645962
CACGCCT27101.0946849E-55.3136535
TCACGCC26805.135112E-55.1044784
CGCCTGT25801.5430345E-45.0232567
Produced by FastQC (version 0.11.5)