FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005738497

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005738497
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2482407
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG1900.087.157898
TCGGCGG2300.068.869579
TATCGGC2300.068.869577
TTATCGG3150.048.06
ATTATCG5050.032.792085
TCGTCGC1650.016.58181815-19
CTCGTCG1950.014.7692315-19
CCGGCGA2600.014.40000130-34
CGTCGCT1803.6379788E-1214.415-19
TCCGGCG2750.013.61454525-29
TCGTTAC2450.012.34285615-19
CGATCGG1009.0947526E-411.5199995130-134
CGGCGAG3200.011.24999930-34
ACCGCGC5902.9311157E-410.9830511
ATCCGGC3150.010.97142925-29
GTTACCG3200.010.34999920-24
GCGGGTT3400.010.16470510-14
AATCCGG3301.8189894E-1210.03636425-29
CCGAATC3450.010.0173920-24
GGTTCGT3052.910383E-119.91475415-19
Produced by FastQC (version 0.11.5)